What are some applications where sequence alignment
3. What are some applications where sequence alignment (of some kind) is important?
Group of answer choices
Mapping next generation sequencing reads to a reference genome, i.e. “re-sequencing”
Determining assay specificity, for example design of PCR primers
Predicting the secondary structure of RNA (e.g. single strand nucleic acids)
4. What is the difference between Global Aligment and Local Alignment? What are the famous (named) algorithms associated with identifying the optimal cases of each?
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